dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02240
Location and strand information: 156643 - 158652 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase LacZ
Protein isoelectric point: 4.8195
Protein molecular weight: 76713.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02241
Location and strand information: 158806 - 159612 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02242
Location and strand information: 159745 - 161895 (+)
Family: 4.A.3.2.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02243
Location and strand information: 162007 - 163455 (-)
Family: CBM32|GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8954
Protein molecular weight: 54791.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02244
Location and strand information: 163532 - 164434 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02245
Location and strand information: 164478 - 165386 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02246
Location and strand information: 165457 - 167253 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02247
Location and strand information: 167438 - 169144 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02248
Location and strand information: 169141 - 170313 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02249
Location and strand information: 170510 - 172369 (-)
Family: null
Protein type: null
Protein description: Tetracycline resistance protein TetM from transposon Tn916

Gene clsuter ID: MGYG000002267_7|CGC4
Gene ID: MGYG000002267_02250
Location and strand information: 172619 - 174694 (-)
Family: 8.A.59.4.2
Protein type: TC
Protein description: Regulator of RpoS

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002267_02240	Beta-galactosidase LacZ	CAZyme	156643	158652	-	GH42
MGYG000002267_02241	Arabinose operon regulatory protein	TF	158806	159612	+	HTH_AraC+HTH_AraC
MGYG000002267_02242	hypothetical protein	TC	159745	161895	+	4.A.3.2.6
MGYG000002267_02243	hypothetical protein	CAZyme	162007	163455	-	CBM32\| GH29
MGYG000002267_02244	Lactose transport system permease protein LacG	TC	163532	164434	-	3.A.1.1.29
MGYG000002267_02245	putative multiple-sugar transport system permease YteP	TC	164478	165386	-	3.A.1.1.29
MGYG000002267_02246	hypothetical protein	null	165457	167253	-	No domain
MGYG000002267_02247	hypothetical protein	TC	167438	169144	-	8.A.59.2.1
MGYG000002267_02248	Chemotaxis response regulator protein-glutamate methylesterase	TF	169141	170313	-	HTH_AraC+HTH_AraC
MGYG000002267_02249	Tetracycline resistance protein TetM from transposon Tn916	null	170510	172369	-	GTP_EFTU\| EFG_III\| EFG_IV\| EFG_C
MGYG000002267_02250	Regulator of RpoS	TC	172619	174694	-	8.A.59.4.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature